Oxic_dark_uninhibited_high_methane_biomat_t10 - SRA

SRX19517417: Oxic_dark_uninhibited_high_methane_biomat_t10
1 ILLUMINA (Illumina MiSeq) run: 37,837 spots, 18.5M bases, 9.8Mb downloads

Design: DNA was extracted using a ZymoBiomics DNA/RNA MiniPrep Kit and amplified with primers adapted from Parada et al. (2015) as described in Stamps et al. (2016); barcoded, purified and pooled amplicons sequenced on an Illumina MiSeq at the Genomics and Microarray Core at the University of Colorado Anschutz Medical School ; v2 paired-end 2 x 250 bp chemistry.

Submitted by: Colorado School of Mines

Study: Prado Wetlands Open-Water Wetland Biomat Metagenomes, Metatranscriptomes, and Amplicon Sequences

PRJNA818364 • SRP373778 • All experiments • All runs

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The purpose of this work is to understand the microbial metabolisms contributing to contaminant attenuation and greenhouse gas emissions within a benthic biomat that colonizes open water engineered wetlands in the Prado Wetlands complex.

Sample: oxic_uninhibited_high_methane

SAMN33461975 • SRS16904817 • All experiments • All runs

Organism: wetland metagenome

Library:

Name: O5_t10

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 37,837 spots, 18.5M bases, 9.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR23634115	37,837	18.5M	9.8Mb	2023-04-30

ID:: 26802128

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